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Association rs6983267 polymorphism in lncRNA CCAT2 with gastric cancer susceptibility in Iranian population

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Year: 2018
COI code: CIGS15_509
Paper Language: English

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Authors Association rs6983267 polymorphism in lncRNA CCAT2 with gastric cancer susceptibility in Iranian population

  Seyedeh Mina Amiri-Moghaddam - Department of Biology, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
  Ladan Goshayeshi - Gastroenterology and Hepatology Department, Faculty of medicine, Mashhad University of Medical Sciences, Mashhad Iran - Gastroenterology and Hepatology Research Center, Mashhad University of Medical Sciences, Mashhad Iran- Surgical Oncology Research Cente
  Mehdi Nohtani - Department of Biology, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran
  Ahmad R.Bahrami - Department of Biology, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran.Novel Diagnostics and Therapeutics Research Group, Institute of Biotechnology, Ferdowsi University of Mashhad, Mashhad, Iran
  Maryam M. Matin - Department of Biology, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran.Novel Diagnostics and Therapeutics Research Group, Institute of Biotechnology, Ferdowsi University of Mashhad, Mashhad, Iran.Stem Cell and Regenerative Medicine Resea
  Farzaneh Karimi - Department of Biology, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran

Abstract:

Background: Globally, gastric cancer as one of the leading cause of death, can be affected by both genetic and environmental factors. According to the Iranian Ministry of Health and Medical Educations reports, 50% of all types of cancers in Iran are related to gastrointestinal and liver cancers with gastric cancer contributing to approximately 30% of them. Accumulating evidence suggests that non-coding regions of genome play a key role in cancer susceptibility and there are strong associations between many of (SNPs) single-nucleotide polymorphisms located on these regions with different types of cancers, while these SNPs may have association in one ethnic population the outcome is not extendable globally. Colon cancer-associated transcription 2 (CCAT2), a long non-coding RNA within a gene-free region on 8q24, encompasses the SNP rs6983267 which has been implicated in predisposition to many cancers. Therefore, we studied the role of rs6983267 in gastric cancer predisposition in Iranian population.Method: In present case-control study, the rs6983267 SNP of the genomic DNA samples extracted from blood of 48 patients diagnosed with gastric cancer and 54 healthy controls, was investigated. Genotyping was performed using Taqman method.Result: Hardy-Weinberg equilibrium was conducted with chi-square test in control group, it showed that the genotype distribution of rs6983267 was in equilibrium, (p <0.05, X2 = 0.96), but the genotype frequencies of rs6983267 in healthy controls were not different from those in patients (p > 0.05).Conclusion: No association was observed between rs6983267 and risk of gastric cancer, however, more studies are required in a larger population.

Keywords:

SNP, gastric cancer, rs6983267.

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COI code: CIGS15_509

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Amiri-Moghaddam, Seyedeh Mina; Ladan Goshayeshi; Mehdi Nohtani; Ahmad R.Bahrami; Maryam M. Matin & Farzaneh Karimi, 2018, Association rs6983267 polymorphism in lncRNA CCAT2 with gastric cancer susceptibility in Iranian population, The Third International and 15th National Genetics Congress, تهران, انجمن علمي ژنتيك ايران, https://www.civilica.com/Paper-CIGS15-CIGS15_509.htmlInside the text, wherever referred to or an achievement of this article is mentioned, after mentioning the article, inside the parental, the following specifications are written.
First Time: (Amiri-Moghaddam, Seyedeh Mina; Ladan Goshayeshi; Mehdi Nohtani; Ahmad R.Bahrami; Maryam M. Matin & Farzaneh Karimi, 2018)
Second and more: (Amiri-Moghaddam; Goshayeshi; Nohtani; R.Bahrami; Matin & Karimi, 2018)
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Paper No.: 24953
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