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Bioinformatics analysis of p-protein genes in the medicinal plant phloem leaf of Citrullus colocynthis L.

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Year: 2018
COI code: CIGS15_552
Paper Language: English

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Authors Bioinformatics analysis of p-protein genes in the medicinal plant phloem leaf of Citrullus colocynthis L.

  Masoumeh Dorafshan - Department of Plant Breeding, Ahvaz Branch, Islamic Azad University, Ahvaz, Iran
  Mahdi Soltani Howyzeh - Department of Plant Breeding, Ahvaz Branch, Islamic Azad University, Ahvaz, Iran
  Vahid Shariati - National Institute of Genetic Engineering and Biotechnology, Tehran, Iran

Abstract:

In higher plants, the phloem as a living tissue functions to transporting of nutrients used from leaves to different tissues, such as roots, fruits, flowers, etc., that is composed of micromolecule and macromolecule including amino acids, proteins, RNAs and hormones. The primary phloem have bundles of sieve elements, companion cells, fascicular phloem (FP) and also in the outer part extrafascicular phloem (EFP). Extrafascicular phloem formed an complex network of longitudinal perifascicular strands next to the vascular bundles phloem Called anastomosing that interconnects the vascular bundles to the petiole and stem, effectively known as a strategic defense against pests and diseases, that contain cucurbitacins, terpenoids, alkaloids and proteins. Cucurbitacea family are a unique models for extrafascicular phloem biology. One of the most common genes identified in the EFP is PP1/PP2 proteins. In this study, bioinformatics analysis RNA-Seg with the Sequence Viewer CLC 7 software examined for PP1/PP2 genes in plant species of the Cucurbitaceae family. The results of PP1/PP2 genes alignment showed that these genes had high preservation in domains, and the results of phylogeny tree showed a close evolutionary relationship among studied species.

Keywords:

Citrullus colocynthis, Extrafascicular phloem, PP1/PP2 protein, CLC

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COI code: CIGS15_552

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Dorafshan, Masoumeh; Mahdi Soltani Howyzeh & Vahid Shariati, 2018, Bioinformatics analysis of p-protein genes in the medicinal plant phloem leaf of Citrullus colocynthis L., The Third International and 15th National Genetics Congress, تهران, انجمن علمي ژنتيك ايران, https://www.civilica.com/Paper-CIGS15-CIGS15_552.htmlInside the text, wherever referred to or an achievement of this article is mentioned, after mentioning the article, inside the parental, the following specifications are written.
First Time: (Dorafshan, Masoumeh; Mahdi Soltani Howyzeh & Vahid Shariati, 2018)
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Type: Azad University
Paper No.: 10239
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