Potential Roles of Circular RNAs and Environmental and Clinical Factors in Intervertebral Disc Degeneration
Publish Year: 1400
نوع سند: مقاله ژورنالی
زبان: English
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شناسه ملی سند علمی:
JR_EHEM-9-2_011
تاریخ نمایه سازی: 4 تیر 1401
Abstract:
Background: Intervertebral disc degeneration (IDD) is a common disability in the working-age population. The underlying pathogenesis of IDD needs elucidation. This study aimed to determine differentially expressed circular RNAs (circRNAs) in IDD by bioinformatics. Additionally, the environmental and clinical factors involved in IDD pathogenesis were reviewed.
Methods: The circRNA array profiling of patients with IDD and healthy individuals (GSE۶۷۵۶۶) was acquired from Gene Expression Omnibus (GEO). GEO۲R was employed to analyze the expression profiles of the circRNAs. Functional in silico analysis was done on circRNAs with the highest differential expression. Environmental and clinical factors were reviewed through PubMed and Google Scholar.
Results: Twenty-five circRNAs were differentially expressed in IDD. Two circRNAs (hsa_circRNA_۱۰۱۶۴۵ and hsa_circRNA_۱۰۱۸۵۲) exhibited the most downregulated and upregulated expressions. The functional in silico analysis showed that the aforementioned circRNAs harbored target
sites for AGO۲ and EIF۴A۳ and several microRNAs. The upshots indicated that these ۲ circular circRNAs might sponge hsa-miR-۳۳۰-۳p, hsa-miR-۵۰۲-۵p, hsa-miR-۶۶۲, hsa-miR-۸۷۴, and hsa-miR-۶۴۶ and regulate PSD۳, SIK۲, PCYT۱B, ARID۵B, MTMR۳, and HIPK۲ expressions, which play significant roles
in autophagy and cellular senescence. Temperature, heavy metal exposure, age, overweight, occupation, exercise, hypertension, and smoking were the environmental and clinical factors associated with IDD progression.
Conclusion: Although the results need confirmation by experimental analysis, they reflect the possible role of particular circRNAs in IDD pathogenesis. The controversy concerning the association between IDD and environmental and clinical factors necessitates in-depth population research. Investigating novel molecular regulatory markers like circRNAs could clarify the underlying molecular mechanisms of IDD.
Authors
Mahshid Malakootian
Cardiogenetic Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran
Akram Gholipour
Cardiogenetic Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran
Mahrokh Bagheri Moghaddam
Cardiogenetic Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran
Maziar Oveisee
Corresponding author: Orthopedic Department, Bam University of Medical Sciences, Bam, Kerman, Iran
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