In silico analysis of Omp۲۵ and BLS Brucella melitensis antigens for designing subunit vaccine

Publish Year: 1395
نوع سند: مقاله ژورنالی
زبان: English
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JR_ARCHRAZI-71-1_005

تاریخ نمایه سازی: 6 دی 1402

Abstract:

Brucellosis is a well-known infection in domestic animals which caused by Brucella bacterium. Due toserious economic and medical consequences of this disease, various efforts have been made to prevent theinfection through the use of recombinant vaccines based on Brucella outer membrane protein (OMP)antigens. The objectives of the present study were cloning, sequencing and epitope prediction of Omp۲۵and BLS genes as two major Brucella melitensis antigens. The full-length open reading frame (ORF) ofOmp۲۵ and BLS genes were amplified and cloned into pTZ۵۷R/T vector. Phylogenetic analysis ofsequenced genes showed that both genes were nearly similar in different Brucella species. Several onlineprediction softwares were used to predict B and T-cells epitopes, secondary and tertiary structures,antigenicity ability and enzymatic degradation sites. Bioinformatic tools used in the current study wereconfirmed by the results of three different experimental epitope predictions. Bioinformatic analysisidentified five and two B-cell and two and one T-cell epitopes for Omp۲۵ and BLS antigens, respectively.Finally, according to the antigenicity ability and proteosomal recognition site common B and T-cell epitopewas predicted for Omp۲۵ (۱۵۴-۱۶۲ amino acids) and BLS (۳۷-۴۸ and ۱۱۹-۱۳۹ amino acids). Results of thisstudy might be useful for recombinant vaccine development.

Authors

M. Tahmoorespur

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

M.H. Sekhavati

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

S. Yousefi

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

T. Abbassi-Daloii

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

M. Azghandi

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

R. Akbari

Department of Animal Science, Ferdowsi University of Mashhad, Mashhad, Iran

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  • Berzofsky, J.A., ۱۹۸۵. Intrinsic and extrinsic factors in protein antigenic ...
  • Buus, S., Lauemoller, S.L., Worning, P., Kesmir, C., Frimurer, T., ...
  • Cassataro, J., Estein, S.M., Pasquevich, K.A., Velikovsky, C.A., de la ...
  • Chen, P., Rayner, S., Hu, K.H., ۲۰۱۱. Advances of bioinformatics ...
  • Cloeckaert, A., Verger, J.M., Grayon, M., Zygmunt, M.S., Grepinet, O., ...
  • Cutler, S.J., Whatmore, A.M., Commander, N.J., ۲۰۰۵. Brucellosisnew aspects of ...
  • Delpino, M.V., Estein, S.M., Fossati, C.A., Baldi, P.C., Cassataro, J., ...
  • Donnes, P., Elofsson, A., ۲۰۰۲. Prediction of MHC class I ...
  • Edmonds, M.D., Cloeckaert, A., Elzer, P.H., ۲۰۰۲. Brucella species lacking ...
  • Geourjon, C., Deleage, G., ۱۹۹۵. SOPMA: significant improvements in protein ...
  • Gu, J., Bourne, P.E., ۲۰۰۹. Structural Bioinformatics, Wiley ...
  • Gupta, V.K., Vohra, J., Kumari, R., Gururaj, K., Vihan, V.S., ...
  • Hopp, T.P., Woods, K.R., ۱۹۸۱. Prediction of protein antigenic determinants ...
  • Karthik, K., Rathore, R., Verma, A.K., Tiwari, R., Dhama, K., ...
  • Li, Y., Liu, X., Zhu, Y., Zhou, X., Cao, C., ...
  • Noguchi, H., Kato, R., Hanai, T., Matsubara, Y., Honda, H., ...
  • Pappas, G., Papadimitriou, P., Christou, L., Akritidis, N., ۲۰۰۶. Future ...
  • Rajagunalan, S., Kumari, G., Gupta, S.K., Kumar, A., Agarwal, R.K., ...
  • Sambrook, J., Russell, D.W., ۲۰۰۱. Molecular Cloning: A Laboratory Manual, ...
  • Simon, G.G., Hu, Y., Khan, A.M., Zhou, J., Salmon, J., ...
  • Steere, A.C., Drouin, E.E., Glickstein, L.J., ۲۰۱۱. Relationship between immunity ...
  • Toes, R.E., Nussbaum, A.K., Degermann, S., Schirle, M., Emmerich, N.P., ...
  • Wass, M.N., Sternberg, M.J., ۲۰۰۹. Prediction of ligand binding sites ...
  • Zhang, W., Liu, J., Zhao, M., Li, Q., ۲۰۱۲ . ...
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